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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816359.1_cds_XP_016498774.1_12764
CDS Infomation

[gene=LOC107817457] [db_xref=GeneID:107817457] [protein=probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 isoform X2] [protein_id=XP_016498774.1] [location=complement(join(191163..191254,191919..192037,192140..192249,192575..192676,192759..192908,193660..193815,194333..194422,195819..195938,196074..196169,196582..196718,198452..198689))] [gbkey=CDS]
Sequence

ATGGCTGTAGCTTCAGCAGCTCCATTATTGGCAATGAACGGAGCTGTAAAAATGGCGACA
AATTCACAAGTATACTTAGAAGGAACAAAGGTCAAAGAAACCAAGTCCTTAATAGCCGAA
TTGTGCCGCCATTTTTACAATCAGGGTTGGGTTTCCGGCACCGGCGGCAGCATCACCATT
AAAGTTAATGATGATTCCATTCCTAAACCTCAACAACTTATTGTCATGTCCCCTTCAGGG
GTGCAAAAGGAAAGGATGGTGGAAGAGGATATGTATGTATTGTCTTCAAACGGGTGTGTT
TTATCTGCGCCATTGGCTAAACCGTACCCATATAAGTCTCCCAAGTGTTCTGATTGTGCT
CCTTTGTTTTTAAAGGCTTATGAGATGCGTAATGCTGGTGCTGTTATCCATAGTCATGGA
ATGGAATCCTGTATAGTAACAATGCTCAATCCACTGTTAAAAGAATTTCGGATCACTCAT
ATGGAAATGATCAAAGGAATTCAAGGGCACGGTTATTATGATGAACTTGTGGTCCCTATC
ATAGAGAACACTGCGCATGAGAGAGAACTCACGGAATCTCTTACAGAAGCAATAAAAGCT
TACCCAAAGACAACAGCCGTGCTGGTCCGGAACCATGGGATATATGTATGGGGAGATTCT
TGGATCAGTGCTAAAACTCAGCGTTGTGTCGTTTTGGATATTGAAGGAACCACAACGCCC
ATATCATTTGTTATAGATGTGCTTTTTCCTTATGCTCGTGATAATGTGGGGAGACATTTG
GATGCAACATATGATTCAGCAGAAACCCAGGAGGATATTAAGCTTCTAAGAGCTCAAGTA
CAAGAAGACTTGGAAAACGGTGTTGTCGGTGCTGTACCTATCCCCTCTGATGATGCTGGG
AAGGAGGAAGTAATTGCAGCTTTGGTTACAAATGTTGAGGCAATGATTAAAGCTGACCGA
AAGATTACTGCCTTAAAGGAGTTACAGGGGCATATATGGCAAACCGGGTTTCAAAATAAT
GAGTTAGAGGCAGTTGTTTTTGATGATGTGCCCGAAGCTCTTGAGAGATGGACTGCTTTA
GGCCTCAAGGTGTACATATACTCAAGTGGAAGCAGATTGGCACAAAGGCTTATCTTTGGT
TACACAAACTATGGAGACCTGAGAAAATATCTCTGTGGATTTTTTGATACAACAGTGGGG
AATAAGAGAGAAACAAAAAGTTACACTGAAATTACGGCATCCTTGGGAGTAGATAACCCA
TCTGAGATTTTGTTTGTGACGGACGTCTATCAAGAAGCCATAGCTGCAAAGGCAGCAGGT
TTGGAAGTGATAATCTCAGTCAGGCCAGGGAATGGACCTTTACCAGAAAATCATGGCTTC
AGGACAATCACATCCTTTTCAGAGATCTAA

Peptide Sequence

PEP ID

XP_016498774.1
PEP Infomation

PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 isoform X2 [Nicotiana tabacum]
Sequence

MAVASAAPLLAMNGAVKMATNSQVYLEGTKVKETKSLIAELCRHFYNQGWVSGTGGSITI
KVNDDSIPKPQQLIVMSPSGVQKERMVEEDMYVLSSNGCVLSAPLAKPYPYKSPKCSDCA
PLFLKAYEMRNAGAVIHSHGMESCIVTMLNPLLKEFRITHMEMIKGIQGHGYYDELVVPI
IENTAHERELTESLTEAIKAYPKTTAVLVRNHGIYVWGDSWISAKTQRCVVLDIEGTTTP
ISFVIDVLFPYARDNVGRHLDATYDSAETQEDIKLLRAQVQEDLENGVVGAVPIPSDDAG
KEEVIAALVTNVEAMIKADRKITALKELQGHIWQTGFQNNELEAVVFDDVPEALERWTAL
GLKVYIYSSGSRLAQRLIFGYTNYGDLRKYLCGFFDTTVGNKRETKSYTEITASLGVDNP
SEILFVTDVYQEAIAAKAAGLEVIISVRPGNGPLPENHGFRTITSFSEI

Transcript Sequence

Gene sequence data has not been registered.